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Metagenome-Assembled Genome: ERR8263759_bin.6_MetaWRAP_v1.3_MAG

Identifiers
BioSample: SAMEA114060517; SRA: ERS16044384
Organism
uncultured Blautia sp.
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia; environmental samples
Attributes
broad-scale environmental contextHuman digestive system
collection datenot provided
environmental mediumfaeces
geographic locationnot provided
investigation typemetagenome-assembled genome
isolation sourcehuman feces metagenome
project nameShotgun microbiome analysis of gut microbiome from a randomized clinical trial looking at the effect of a probiotic product on sleep quality compared to a placebo control (N=70, 35 vs 35).
sample nameERR8263759_bin.6_MetaWRAP_v1.3_MAG
ENA-CHECKLISTERC000047
ENA-FIRST-PUBLIC2023-07-13T16:22:51Z
ENA-LAST-UPDATE2023-07-13T16:22:51Z
External IdSAMEA114060517
INSDC center aliasEMG
INSDC center nameEMG
INSDC first public2023-07-13T16:22:51Z
INSDC last update2023-07-13T16:22:51Z
INSDC statuspublic
Submitter IdERR8263759_bin.6_MetaWRAP_v1.3_MAG
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwaremetaspades v3.15.3
binning parametersMaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.
binning softwareMetaWRAP v1.3
broker nameEMG broker account, EMBL-EBI
completeness score98.73
completeness softwareCheckM
contamination score0.0
geographic location (latitude)not provided
geographic location (longitude)not provided
local environmental contextcolon
metagenomic sourcehuman feces metagenome
sample derived fromSAMEA12675022
scientific_nameuncultured Blautia sp.
sequencing methodIllumina NovaSeq 6000
taxonomic classificationThe taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Eubacteriales;f__Lachnospiraceae;g__Blautia;s__
taxonomic identity markermulti-marker approach
Description

This sample represents a Third Party Annotation (TPA) metagenome-assembled genome assembled from the metagenomic run ERR8263759 of study ERP135087.

BioProject
PRJEB62833
Retrieve all samples from this project

Submission
EBI; 2023-07-17
Accession:
SAMEA114060517
ID:
36476660

BioProject Nucleotide

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