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This sample represents a MAG derived from the metagenomic sample SAMN10093317

Identifiers
BioSample: SAMEA114581955; SRA: ERS16681085
Organism
Fusicatenibacter saccharivorans
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Fusicatenibacter
Attributes
broad-scale environmental contexthominid body
collection date2012/2013
environmental mediumfeces
geographic locationDenmark
investigation typemetagenome-assembled genome
isolation sourceFeces of Homo sapiens (DK)
sample nameE07184-L1_cleanbin_000019
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2023-11-07T00:47:29Z
ENA-LAST-UPDATE2023-11-07T00:47:29Z
External IdSAMEA114581955
INSDC center nameICMB
INSDC first public2023-11-07T00:47:29Z
INSDC last update2023-11-07T00:47:29Z
INSDC statuspublic
Submitter IdE07184-L1_cleanbin_000019
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwarespades
binning parametersrefined binning from maxbin2 metabat2 vamb and concoct
binning softwareMAGSCoT
completeness score99.16666667
completeness softwareMAGSCoT
contamination score5.833333333
contamination softwareMAGSCoT
geographic location (latitude)not collected
geographic location (longitude)not collected
local environmental contexthominid gut
metagenomic sourceHuman gut
sample derived fromSAMN10093317
scientific_nameFusicatenibacter saccharivorans
taxonomic classificationgtdtbk
taxonomic identity markergtdtbtk marker gene sets
BioProject
PRJEB68160 Functional host-specific adaptation of the intestinal microbiome in hominids
Retrieve all samples from this project

Submission
EBI; 2023-11-09
Accession:
SAMEA114581955
ID:
38173595

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