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This sample represents a MAG derived from the metagenomic sample SAMN17312223

Identifiers
BioSample: SAMEA114584199; SRA: ERS16683348
Organism
Bulleidia sp.
cellular organisms; Bacteria; Bacillati; Bacillota; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Bulleidia; unclassified Bulleidia
Attributes
broad-scale environmental contexthominid body
collection date2001/2014
environmental mediumfeces
geographic locationCote d'Ivoire
investigation typemetagenome-assembled genome
isolation sourceFeces of Pan troglodytes verus
sample nameSID5420-1_cleanbin_000004
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2023-11-07T00:47:09Z
ENA-LAST-UPDATE2023-11-07T00:47:09Z
External IdSAMEA114584199
INSDC center nameICMB
INSDC first public2023-11-07T00:47:09Z
INSDC last update2023-11-07T00:47:09Z
INSDC statuspublic
Submitter IdSID5420-1_cleanbin_000004
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwarespades
binning parametersrefined binning from maxbin2 metabat2 vamb and concoct
binning softwareMAGSCoT
completeness score84.17
completeness softwareMAGSCoT
contamination score7.5
contamination softwareMAGSCoT
geographic location (latitude)not collected
geographic location (longitude)not collected
local environmental contexthominid gut
metagenomic sourcePan troglodytes gut
sample derived fromSAMN17312223
scientific_nameBulleidia sp.
taxonomic classificationgtdtbk
taxonomic identity markergtdtbtk marker gene sets
BioProject
PRJEB68160 Functional host-specific adaptation of the intestinal microbiome in hominids
Retrieve all samples from this project

Submission
EBI; 2023-11-09
Accession:
SAMEA114584199
ID:
38175839

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