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This sample represents a MAG derived from the metagenomic sample SAMN11515236

Identifiers
BioSample: SAMEA114585579; SRA: ERS16684728
Organism
Acutalibacteraceae bacterium
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Acutalibacteraceae; unclassified Acutalibacteraceae
Attributes
broad-scale environmental contexthominid body
collection date2013
environmental mediumfeces
geographic locationRepublic of the Congo
investigation typemetagenome-assembled genome
isolation sourceFeces of Gorilla gorilla gorilla (CG)
sample nameH07603-L1_cleanbin_000029
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2023-11-07T00:47:00Z
ENA-LAST-UPDATE2023-11-07T00:47:00Z
External IdSAMEA114585579
INSDC center nameICMB
INSDC first public2023-11-07T00:47:00Z
INSDC last update2023-11-07T00:47:00Z
INSDC statuspublic
Submitter IdH07603-L1_cleanbin_000029
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwarespades
binning parametersrefined binning from maxbin2 metabat2 vamb and concoct
binning softwareMAGSCoT
completeness score95.83333333
completeness softwareMAGSCoT
contamination score0.833333333
contamination softwareMAGSCoT
geographic location (latitude)not collected
geographic location (longitude)not collected
local environmental contexthominid gut
metagenomic sourceGorilla gorilla gut
sample derived fromSAMN11515236
scientific_nameAcutalibacteraceae bacterium
taxonomic classificationgtdtbk
taxonomic identity markergtdtbtk marker gene sets
BioProject
PRJEB68160 Functional host-specific adaptation of the intestinal microbiome in hominids
Retrieve all samples from this project

Submission
EBI; 2023-11-09
Accession:
SAMEA114585579
ID:
38177219

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