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This sample represents a MAG derived from the metagenomic sample SAMN17312170

Identifiers
BioSample: SAMEA114586043; SRA: ERS16685192
Organism
Anaerovoracaceae bacterium
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales; Anaerovoracaceae; unclassified Anaerovoracaceae
Attributes
broad-scale environmental contexthominid body
collection date2011
environmental mediumfeces
geographic locationUganda
investigation typemetagenome-assembled genome
isolation sourceFeces of Gorilla beringei beringei
sample nameH07617-L1_cleanbin_000012
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2023-11-07T00:46:58Z
ENA-LAST-UPDATE2023-11-07T00:46:58Z
External IdSAMEA114586043
INSDC center nameICMB
INSDC first public2023-11-07T00:46:58Z
INSDC last update2023-11-07T00:46:58Z
INSDC statuspublic
Submitter IdH07617-L1_cleanbin_000012
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwarespades
binning parametersrefined binning from maxbin2 metabat2 vamb and concoct
binning softwareMAGSCoT
completeness score96.67
completeness softwareMAGSCoT
contamination score0.83
contamination softwareMAGSCoT
geographic location (latitude)not collected
geographic location (longitude)not collected
local environmental contexthominid gut
metagenomic sourceGorilla beringei gut
sample derived fromSAMN17312170
scientific_nameAnaerovoracaceae bacterium
taxonomic classificationgtdtbk
taxonomic identity markergtdtbtk marker gene sets
BioProject
PRJEB68160 Functional host-specific adaptation of the intestinal microbiome in hominids
Retrieve all samples from this project

Submission
EBI; 2023-11-09
Accession:
SAMEA114586043
ID:
38177682

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