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This sample represents a MAG derived from the metagenomic sample SAMN11515235

Identifiers
BioSample: SAMEA114586109; SRA: ERS16685258
Organism
bacterium
cellular organisms; Bacteria; unclassified Bacteria
Attributes
broad-scale environmental contexthominid body
collection date2013
environmental mediumfeces
geographic locationRepublic of the Congo
investigation typemetagenome-assembled genome
isolation sourceFeces of Gorilla gorilla gorilla (CG)
sample nameH07618-L1_cleanbin_000015
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2023-11-07T00:47:04Z
ENA-LAST-UPDATE2023-11-07T00:47:04Z
External IdSAMEA114586109
INSDC center nameICMB
INSDC first public2023-11-07T00:47:04Z
INSDC last update2023-11-07T00:47:04Z
INSDC statuspublic
Submitter IdH07618-L1_cleanbin_000015
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwarespades
binning parametersrefined binning from maxbin2 metabat2 vamb and concoct
binning softwareMAGSCoT
completeness score85
completeness softwareMAGSCoT
contamination score5
contamination softwareMAGSCoT
geographic location (latitude)not collected
geographic location (longitude)not collected
local environmental contexthominid gut
metagenomic sourceGorilla gorilla gut
sample derived fromSAMN11515235
scientific_namebacterium
taxonomic classificationgtdtbk
taxonomic identity markergtdtbtk marker gene sets
BioProject
PRJEB68160 Functional host-specific adaptation of the intestinal microbiome in hominids
Retrieve all samples from this project

Submission
EBI; 2023-11-09
Accession:
SAMEA114586109
ID:
38177748

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