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This sample represents a MAG derived from the metagenomic sample SAMN10093185

Identifiers
BioSample: SAMEA114587109; SRA: ERS16686258
Organism
uncultured Eubacteriales bacterium
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; environmental samples
Attributes
broad-scale environmental contexthominid body
collection date2012/2013
environmental mediumfeces
geographic locationDenmark
investigation typemetagenome-assembled genome
isolation sourceFeces of Homo sapiens (DK)
sample nameH07641-L1_cleanbin_000023
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2023-11-07T00:46:58Z
ENA-LAST-UPDATE2023-11-07T00:46:58Z
External IdSAMEA114587109
INSDC center nameICMB
INSDC first public2023-11-07T00:46:58Z
INSDC last update2023-11-07T00:46:58Z
INSDC statuspublic
Submitter IdH07641-L1_cleanbin_000023
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwarespades
binning parametersrefined binning from maxbin2 metabat2 vamb and concoct
binning softwareMAGSCoT
completeness score78.33333333
completeness softwareMAGSCoT
contamination score5
contamination softwareMAGSCoT
geographic location (latitude)not collected
geographic location (longitude)not collected
local environmental contexthominid gut
metagenomic sourceHuman gut
sample derived fromSAMN10093185
scientific_nameuncultured Eubacteriales bacterium
taxonomic classificationgtdtbk
taxonomic identity markergtdtbtk marker gene sets
BioProject
PRJEB68160 Functional host-specific adaptation of the intestinal microbiome in hominids
Retrieve all samples from this project

Submission
EBI; 2023-11-09
Accession:
SAMEA114587109
ID:
38178748

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