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This sample represents a MAG derived from the metagenomic sample SAMN11515225

Identifiers
BioSample: SAMEA114587600; SRA: ERS16686749
Organism
Erysipelotrichaceae bacterium
cellular organisms; Bacteria; Bacillati; Bacillota; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; unclassified Erysipelotrichaceae
Attributes
broad-scale environmental contexthominid body
collection date2013
environmental mediumfeces
geographic locationRepublic of the Congo
investigation typemetagenome-assembled genome
isolation sourceFeces of Gorilla gorilla gorilla (CG)
sample nameH07651-L1_cleanbin_000012
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2023-11-07T00:47:06Z
ENA-LAST-UPDATE2023-11-07T00:47:06Z
External IdSAMEA114587600
INSDC center nameICMB
INSDC first public2023-11-07T00:47:06Z
INSDC last update2023-11-07T00:47:06Z
INSDC statuspublic
Submitter IdH07651-L1_cleanbin_000012
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwarespades
binning parametersrefined binning from maxbin2 metabat2 vamb and concoct
binning softwareMAGSCoT
completeness score88.33333333
completeness softwareMAGSCoT
contamination score4.166666667
contamination softwareMAGSCoT
geographic location (latitude)not collected
geographic location (longitude)not collected
local environmental contexthominid gut
metagenomic sourceGorilla gorilla gut
sample derived fromSAMN11515225
scientific_nameErysipelotrichaceae bacterium
taxonomic classificationgtdtbk
taxonomic identity markergtdtbtk marker gene sets
BioProject
PRJEB68160 Functional host-specific adaptation of the intestinal microbiome in hominids
Retrieve all samples from this project

Submission
EBI; 2023-11-09
Accession:
SAMEA114587600
ID:
38179239

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