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This sample represents a MAG derived from the metagenomic sample SAMN17312143

Identifiers
BioSample: SAMEA114588191; SRA: ERS16687340
Organism
Waltera intestinalis
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Waltera
Attributes
broad-scale environmental contexthominid body
collection date2011/2014
environmental mediumfeces
geographic locationGermany
investigation typemetagenome-assembled genome
isolation sourceFeces of Homo sapiens (GER)
sample nameH07668-L1_cleanbin_000006
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2023-11-07T00:47:18Z
ENA-LAST-UPDATE2023-11-07T00:47:18Z
External IdSAMEA114588191
INSDC center nameICMB
INSDC first public2023-11-07T00:47:18Z
INSDC last update2023-11-07T00:47:18Z
INSDC statuspublic
Submitter IdH07668-L1_cleanbin_000006
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwarespades
binning parametersrefined binning from maxbin2 metabat2 vamb and concoct
binning softwareMAGSCoT
completeness score99.17
completeness softwareMAGSCoT
contamination score8.33
contamination softwareMAGSCoT
geographic location (latitude)not collected
geographic location (longitude)not collected
local environmental contexthominid gut
metagenomic sourceHuman gut
sample derived fromSAMN17312143
scientific_nameWaltera intestinalis
taxonomic classificationgtdtbk
taxonomic identity markergtdtbtk marker gene sets
BioProject
PRJEB68160 Functional host-specific adaptation of the intestinal microbiome in hominids
Retrieve all samples from this project

Submission
EBI; 2023-11-09
Accession:
SAMEA114588191
ID:
38179830

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