MAG for uncultured Verrucomicrobiae bacterium

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Result Filters

Organism: uncultured Verrucomicrobiae bacterium
cellular organisms; Bacteria; Pseudomonadati; PVC group; Verrucomicrobiota; Verrucomicrobiia; environmental samples

Attributes

broad-scale environmental context	Grassland formations
collection date	2020-05-28
environmental medium	not collected
geographic location	Denmark
isolation source	soil
project name	Microflora Danica
sample name	MFD00962.bin.3.584
ENA first public	2024-12-25
ENA-CHECKLIST	ERC000011
External Id	SAMEA114809416
INSDC center name	Center for Microbial Communities
INSDC last update	2023-12-07T09:58:57Z
INSDC status	public
Submitter Id	MFD00962.bin.3.584
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parameters	Ensemble iterative binning using coverage and kmer
binning software	MetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score	80.47
completeness software	CheckM2
contamination score	4.91
geographic location (latitude)	55.5165
geographic location (longitude)	11.7698
local environmental context	Semi-natural dry grasslands
metagenomic source	soil metagenome
sample derived from	ERS14381627
scientific_name	uncultured Verrucomicrobiae bacterium
taxonomic identity marker	multi-marker approach

Description: MQ MAG for uncultured Verrucomicrobiae bacterium, recovered from an environmental sample from Denmark

BioProject: PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project