MAG for uncultured bacterium

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Organism: uncultured bacterium
cellular organisms; Bacteria; environmental samples

Attributes

broad-scale environmental context	Freshwater
collection date	2021-07-26
environmental medium	not collected
geographic location	Denmark
isolation source	sediment
project name	Microflora Danica
sample name	MFD01476.bin.1.25
ENA first public	2024-12-25
ENA-CHECKLIST	ERC000011
External Id	SAMEA114810489
INSDC center name	Center for Microbial Communities
INSDC last update	2023-12-07T09:59:05Z
INSDC status	public
Submitter Id	MFD01476.bin.1.25
assembly quality	Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes and at least 18 tRNAs
binning parameters	Ensemble iterative binning using coverage and kmer
binning software	MetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score	93.69
completeness software	CheckM2
contamination score	3.22
geographic location (latitude)	56.50596583
geographic location (longitude)	8.826613964
local environmental context	Standing freshwater
metagenomic source	sediment metagenome
sample derived from	ERS14381676
scientific_name	uncultured bacterium
taxonomic identity marker	multi-marker approach

Description: HQ MAG for uncultured bacterium, recovered from an environmental sample from Denmark

BioProject: PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project