MAG for uncultured Gemmatimonadales bacterium

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Result Filters

Organism: uncultured Gemmatimonadales bacterium
cellular organisms; Bacteria; Pseudomonadati; FCB group; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales; environmental samples

Attributes

broad-scale environmental context	Coastal
collection date	2021-06-24
environmental medium	not collected
geographic location	Denmark
isolation source	soil
project name	Microflora Danica
sample name	MFD01721.bin.c.5
ENA first public	2024-12-25
ENA-CHECKLIST	ERC000011
External Id	SAMEA114811220
INSDC center name	Center for Microbial Communities
INSDC last update	2023-12-07T09:59:10Z
INSDC status	public
Submitter Id	MFD01721.bin.c.5
assembly quality	Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
binning parameters	Ensemble iterative binning using coverage and kmer
binning software	MetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score	97.65
completeness software	CheckM2
contamination score	3.13
geographic location (latitude)	55.4485
geographic location (longitude)	10.5019
local environmental context	Salt marshes and salt meadows
metagenomic source	soil metagenome
sample derived from	ERS14381693
scientific_name	uncultured Gemmatimonadales bacterium
taxonomic identity marker	multi-marker approach

Description: HQ MAG for uncultured Gemmatimonadales bacterium, recovered from an environmental sample from Denmark

BioProject: PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project