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MAG for Sulfurovaceae bacterium

Identifiers
BioSample: SAMEA114815107; SRA: ERS17239974
Organism
Sulfurovaceae bacterium
cellular organisms; Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Sulfurovaceae; unclassified Sulfurovaceae
Attributes
broad-scale environmental contextFreshwater
collection date2020-08-11
environmental mediumnot collected
geographic locationDenmark
isolation sourcesediment
project nameMicroflora Danica
sample nameMFD03804.bin.2.58
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114815107
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:59:32Z
INSDC statuspublic
Submitter IdMFD03804.bin.2.58
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score90.04
completeness softwareCheckM2
contamination score9.39
geographic location (latitude)56.6925
geographic location (longitude)8.2025
local environmental contextStanding freshwater
metagenomic sourcesediment metagenome
sample derived fromERS14381632
scientific_nameSulfurovaceae bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for Sulfurovaceae bacterium, recovered from an environmental sample from Denmark

BioProject
PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project

Submission
EBI; 2024-12-26
Accession:
SAMEA114815107
ID:
45982692

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