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MAG for uncultured Solirubrobacterales bacterium

Identifiers
BioSample: SAMEA114815994; SRA: ERS17240861
Organism
uncultured Solirubrobacterales bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; Thermoleophilia; Solirubrobacterales; environmental samples
Attributes
broad-scale environmental contextDunes
collection date2021-11-21
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD04212.bin.3.309
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114815994
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:59:34Z
INSDC statuspublic
Submitter IdMFD04212.bin.3.309
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score54.33
completeness softwareCheckM2
contamination score3.2
geographic location (latitude)55.0396
geographic location (longitude)12.2823
local environmental contextSea dunes
metagenomic sourcesoil metagenome
sample derived fromERS14381701
scientific_nameuncultured Solirubrobacterales bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Solirubrobacterales bacterium, recovered from an environmental sample from Denmark

BioProject
PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project

Submission
EBI; 2024-12-26
Accession:
SAMEA114815994
ID:
45979098

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