U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MAG for uncultured Acidobacteriaceae bacterium

Identifiers
BioSample: SAMEA114828935; SRA: ERS17253802
Organism
uncultured Acidobacteriaceae bacterium
cellular organisms; Bacteria; Pseudomonadati; Acidobacteriota; Terriglobia; Terriglobales; Acidobacteriaceae; environmental samples
Attributes
broad-scale environmental contextTemperate heath and scrub
collection date2020-08-05
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD09222.bin.3.45
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114828935
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:15Z
INSDC statuspublic
Submitter IdMFD09222.bin.3.45
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score74.82
completeness softwareCheckM2
contamination score2.79
geographic location (latitude)56.2643
geographic location (longitude)9.2476
local environmental contextTemperate heath
metagenomic sourcesoil metagenome
sample derived fromERS15928288
scientific_nameuncultured Acidobacteriaceae bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Acidobacteriaceae bacterium, recovered from an environmental sample from Denmark

BioProject
PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project

Submission
EBI; 2024-12-26
Accession:
SAMEA114828935
ID:
45982092

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center