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MAG for Ilumatobacteraceae bacterium

Identifiers
BioSample: SAMEA114833373; SRA: ERS17258239
Organism
Ilumatobacteraceae bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; Acidimicrobiia; Acidimicrobiales; Ilumatobacteraceae; unclassified Ilumatobacteraceae
Attributes
broad-scale environmental contextFreshwater
collection date2022-04-21
environmental mediumnot collected
geographic locationDenmark
isolation sourcesediment
project nameMicroflora Danica
sample nameMFD09848.bin.3.172
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114833373
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:26Z
INSDC statuspublic
Submitter IdMFD09848.bin.3.172
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score53.15
completeness softwareCheckM2
contamination score1.64
geographic location (latitude)55.4573
geographic location (longitude)12.025
local environmental contextStanding freshwater
metagenomic sourcesediment metagenome
sample derived fromERS15928291
scientific_nameIlumatobacteraceae bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for Ilumatobacteraceae bacterium, recovered from an environmental sample from Denmark

BioProject
PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project

Submission
EBI; 2024-12-26
Accession:
SAMEA114833373
ID:
45984391

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