U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MAG for Ilumatobacteraceae bacterium

Identifiers
BioSample: SAMEA114833834; SRA: ERS17258701
Organism
Ilumatobacteraceae bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; Acidimicrobiia; Acidimicrobiales; Ilumatobacteraceae; unclassified Ilumatobacteraceae
Attributes
broad-scale environmental contextSaltwater
collection date2022-02-22
environmental mediumnot collected
geographic locationDenmark
isolation sourcesediment
project nameMicroflora Danica
sample nameMFD09964.bin.2.183
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114833834
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:28Z
INSDC statuspublic
Submitter IdMFD09964.bin.2.183
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score84.34
completeness softwareCheckM2
contamination score0.73
geographic location (latitude)56.5565
geographic location (longitude)9.0763
local environmental contextFjords
metagenomic sourcesediment metagenome
sample derived fromERS16252372
scientific_nameIlumatobacteraceae bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for Ilumatobacteraceae bacterium, recovered from an environmental sample from Denmark

BioProject
PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project

Submission
EBI; 2024-12-26
Accession:
SAMEA114833834
ID:
45985403

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center