MAG for uncultured Alphaproteobacteria bacterium

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Result Filters

Organism: uncultured Alphaproteobacteria bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; environmental samples

Attributes

broad-scale environmental context	Dunes
collection date	2020-08-23
environmental medium	not collected
geographic location	Denmark
isolation source	soil
project name	Microflora Danica
sample name	MFD10064.bin.1.59
ENA first public	2024-12-25
ENA-CHECKLIST	ERC000011
External Id	SAMEA114834796
INSDC center name	Center for Microbial Communities
INSDC last update	2023-12-07T10:00:31Z
INSDC status	public
Submitter Id	MFD10064.bin.1.59
assembly quality	Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes and at least 18 tRNAs
binning parameters	Ensemble iterative binning using coverage and kmer
binning software	MetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score	100
completeness software	CheckM2
contamination score	1.15
geographic location (latitude)	56.91759
geographic location (longitude)	8.42712
local environmental context	Sea dunes
metagenomic source	soil metagenome
sample derived from	ERS14381610
scientific_name	uncultured Alphaproteobacteria bacterium
taxonomic identity marker	multi-marker approach