ENTB

Organism: Enterocloster aldenensis
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Enterocloster

Attributes

broad-scale environmental context	In vitro culture derivated from samples from the gut of chinchilla (Chinchilla lanigera)
collection date	2021-08
environmental medium	Incubated at 37ºC
geographic location	Czech Republic
investigation type	metagenome-assembled genome
isolation source	The genomes here correspond to 24 metagenome-assembled genomes of the 30 bacteria identified that grow together with Monocercomonoides exilis in TYSGM-9 medium.
project name	PRJEB70623
sample name	ena-SAMPLE-TAB-10-01-2024-09:53:06:039-238938
ENA-CHECKLIST	ERC000050
ENA-FIRST-PUBLIC	2024-02-29T00:36:26Z
ENA-LAST-UPDATE	2024-02-29T00:36:26Z
External Id	SAMEA115094466
INSDC center name	BIOCEV
INSDC first public	2024-02-29T00:36:26Z
INSDC last update	2024-02-29T00:36:26Z
INSDC status	public
Submitter Id	ena-SAMPLE-TAB-10-01-2024-09:53:06:039-238938
assembly quality	Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software	metaSPAdes v.3.14.0, k-mers set 21,33,55,77,99,127, default parameters otherwise
binning parameters	coverage and kmer
binning software	MaxBin v2.2.7
completeness score	94.4
completeness software	MaxBin v2.2.7 marker set 107
contamination score	3
geographic location (latitude)	+49.980897
geographic location (longitude)	+14.487539
local environmental context	TYSGM-9 medium
metagenomic source	rodent metagenome
sample derived from	SAMEA115084009-SAMEA115084017
scientific_name	Enterocloster aldenensis
sequencing method	HiSeq4000
taxonomic identity marker	16S gene

BioProject: PRJEB70623 Comprehensive analysis of the microbial consortium in the culture of flagellate Monocercomonoides exilis
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BioSample