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Metagenome-assembled genome: SRR5788413_metabat2_14

Identifiers
BioSample: SAMEA115401706; SRA: ERS18422287
Organism
uncultured Candidatus Poseidoniales archaeon
cellular organisms; Archaea; Methanobacteriati; Thermoplasmatota; Candidatus Poseidoniia; Candidatus Poseidoniales; environmental samples
Attributes
broad-scale environmental contextwater
collection date2011-11-30
environmental mediumocean
geographic locationAtlantic Ocean
investigation typemetagenome-assembled genome
isolation sourcemarine metagenome
project nameMarine metagenomes from the bioGEOTRACES project Metagenome
sample nameSRR5788413_metabat2_14
ENA first public2024-03-12
ENA-CHECKLISTERC000047
INSDC center nameEMG
INSDC statuspublic
Submitter IdSRR5788413_metabat2_14
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwaremetaspades_v3.15.3
binning parametersdefault
binning softwareMGnify-genomes-generation-pipeline_v1.0.0
broker nameEBI-EMG
completeness score76.04
completeness softwareCheckM2_v1.0.1
contamination score0.57
geographic location (latitude)26.13688000
geographic location (longitude)-44.82622000
local environmental contextmarine
metagenomic sourcemarine metagenome
sample derived fromSAMN07136574
scientific_nameuncultured Candidatus Poseidoniales archaeon
sequencing methodNextSeq 550
taxonomic identity markermulti-marker approach
Description

This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR5788413 of study SRP110813.

BioProject
PRJEB45427
Retrieve all samples from this project

Submission
EBI; 2024-06-04
Accession:
SAMEA115401706
ID:
41666004

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