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Metagenome-Assembled Genome (MAG)

Identifiers
BioSample: SAMEA13567240; SRA: ERS11169166
Organism
Haemophilus parainfluenzae
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus
Attributes
collection datenot provided
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
environmental mediumfaeces
geographic locationnot provided
investigation typemetagenome-assembled genome
isolation sourcehuman gut
project nameDonor samples from Lyophilised oral faecal microbiota transplantation for ulcerative colitis (LOTUS) study shotgun
sample nameMTG242_bin.33.fa
ENA-CHECKLISTERC000050
ENA-FIRST-PUBLIC2022-07-28T00:45:16Z
ENA-LAST-UPDATE2022-07-28T00:45:16Z
External IdSAMEA13567240
INSDC center nameUNIVERSITY OF NEW SOUTH WALES
INSDC first public2022-07-28T00:45:16Z
INSDC last update2022-07-28T00:45:16Z
INSDC statuspublic
Submitter IdMTG242_bin.33.fa
assembly softwareMetaWRAP;1.3.2
binning parametersdefault
binning softwareMetaWRAP;1.3.2
geographic location (latitude)not provided
geographic location (longitude)not provided
metagenomic sourcehuman gut metagenome
sample derived fromERS10468680
scientific_nameHaemophilus parainfluenzae
sequencing methodIllumina
Description

This sample represents a MAG from the metagenomic run ERR8477567

BioProject
PRJEB50699 Oral lyophilised faecal microbiota transplantation in ulcerative colitis shotgun
Retrieve all samples from this project

Submission
EBI; 2022-07-29
Accession:
SAMEA13567240
ID:
30036972

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