Candidatus Staskawiczbacteria bacterium

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Organism: Candidatus Staskawiczbacteria bacterium
cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla; Patescibacteria group; Parcubacteria group; Candidatus Staskawicziibacteriota; unclassified Candidatus Staskawiczbacteria

Attributes

collection date	2018-03-29
broad-scale environmental context	freshwater lake
local-scale environmental context	lake
environmental medium	fresh water
geographic location	Russia
investigation type	metagenome-assembled genome
isolation source	Freshwater lake
project name	PRJNA615165
sample name	Baikal-1350m-131
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2022-06-30
ENA-LAST-UPDATE	2022-06-30
External Id	SAMEA14306344
INSDC center alias	BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO
INSDC center name	BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO
INSDC first public	2022-06-30T00:19:14Z
INSDC last update	2022-06-30T00:19:14Z
INSDC status	public
Submitter Id	Baikal-1350m-131
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	MEGAHIT; kmer set 29,49,69,89,109,119,129,149
binning parameters	coverage and kmer
binning software	MetaBAT2
completeness score	49.64
completeness software	checkm
contamination score	0
geographic location (latitude)	51.833333
geographic location (longitude)	104.783333
metagenomic source	freshwater metagenome
sample derived from	SRS6873687
sequencing method	Illumina Hiseq X Ten
taxonomic identity marker	multi-marker approach