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Human gut genome

Identifiers
BioSample: SAMEA5849847; SRA: ERS3638375
Organism
uncultured Lentisphaeria bacterium
cellular organisms; Bacteria; Pseudomonadati; PVC group; Lentisphaerota; Lentisphaeria; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationSweden
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-00345
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:08Z
ENA-LAST-UPDATE2019-08-09T12:56:00Z
External IdSAMEA5849847
INSDC center nameEMG
INSDC first public2019-08-06T09:56:08Z
INSDC last update2019-08-09T12:56:00Z
INSDC statuspublic
Submitter IdMGYG-HGUT-00345
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Lentisphaeria bacterium
completeness score93.21
contamination score2.03
metagenomic sourcehuman gut metagenome
sample derived fromERS554201
scientific_nameuncultured Lentisphaeria bacterium
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5849847
ID:
12518808

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