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Human gut genome

Identifiers
BioSample: SAMEA5850135; SRA: ERS3638663
Organism
uncultured Victivallales bacterium
cellular organisms; Bacteria; Pseudomonadati; PVC group; Lentisphaerota; Lentisphaeria; Victivallales; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationnot provided
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-00633
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:12Z
ENA-LAST-UPDATE2019-08-09T12:56:02Z
External IdSAMEA5850135
INSDC center nameEMG
INSDC first public2019-08-06T09:56:12Z
INSDC last update2019-08-09T12:56:02Z
INSDC statuspublic
Submitter IdMGYG-HGUT-00633
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Victivallales bacterium
completeness score91.55
contamination score2.03
metagenomic sourcehuman gut metagenome
sample derived fromSRS3638594
scientific_nameuncultured Victivallales bacterium
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5850135
ID:
12519106

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