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Human gut genome

Identifiers
BioSample: SAMEA5850156; SRA: ERS3638684
Organism
uncultured Methanomassiliicoccaceae archaeon
cellular organisms; Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationGermany
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-00654
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:13Z
ENA-LAST-UPDATE2019-08-09T12:56:02Z
External IdSAMEA5850156
INSDC center nameEMG
INSDC first public2019-08-06T09:56:13Z
INSDC last update2019-08-09T12:56:02Z
INSDC statuspublic
Submitter IdMGYG-HGUT-00654
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Methanomassiliicoccaceae bacterium
completeness score97.18
contamination score0.81
metagenomic sourcehuman gut metagenome
sample derived fromERS1444691
scientific_nameuncultured Methanomassiliicoccaceae bacterium
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5850156
ID:
12519127

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