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Human gut genome

Identifiers
BioSample: SAMEA5850555; SRA: ERS3639082
Organism
uncultured Firmicutes bacterium
cellular organisms; Bacteria; Bacillati; Bacillota; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationSpain
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-01052
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:19Z
ENA-LAST-UPDATE2019-08-09T12:56:06Z
External IdSAMEA5850555
INSDC center nameEMG
INSDC first public2019-08-06T09:56:19Z
INSDC last update2019-08-09T12:56:06Z
INSDC statuspublic
Submitter IdMGYG-HGUT-01052
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Firmicutes bacterium
completeness score87.46
contamination score3.82
metagenomic sourcehuman gut metagenome
sample derived fromERS396406
scientific_nameuncultured Firmicutes bacterium
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5850555
ID:
12519525

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