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Human gut genome

Identifiers
BioSample: SAMEA5851307; SRA: ERS3639833
Organism
uncultured Bacteroides sp.
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationDenmark
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-01803
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:31Z
ENA-LAST-UPDATE2019-08-09T12:56:10Z
External IdSAMEA5851307
INSDC center nameEMG
INSDC first public2019-08-06T09:56:31Z
INSDC last update2019-08-09T12:56:10Z
INSDC statuspublic
Submitter IdMGYG-HGUT-01803
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Bacteroides sp.
completeness score94.16
contamination score0.48
metagenomic sourcehuman gut metagenome
sample derived fromERS328887
scientific_nameuncultured Bacteroides sp.
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5851307
ID:
12520280

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