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Human gut genome

Identifiers
BioSample: SAMEA5851350; SRA: ERS3639876
Organism
uncultured Corallococcus sp.
cellular organisms; Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationDenmark
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-01846
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:31Z
ENA-LAST-UPDATE2019-08-09T12:56:10Z
External IdSAMEA5851350
INSDC center nameEMG
INSDC first public2019-08-06T09:56:31Z
INSDC last update2019-08-09T12:56:10Z
INSDC statuspublic
Submitter IdMGYG-HGUT-01846
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Corallococcus sp.
completeness score80.31
contamination score0.02
metagenomic sourcehuman gut metagenome
sample derived fromERS328936
scientific_nameuncultured Corallococcus sp.
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5851350
ID:
12520327

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