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Human gut genome

Identifiers
BioSample: SAMEA5851374; SRA: ERS3639900
Organism
uncultured Phascolarctobacterium sp.
cellular organisms; Bacteria; Bacillati; Bacillota; Negativicutes; Acidaminococcales; Acidaminococcaceae; Phascolarctobacterium; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationDenmark
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-01870
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:32Z
ENA-LAST-UPDATE2019-08-09T12:56:11Z
External IdSAMEA5851374
INSDC center nameEMG
INSDC first public2019-08-06T09:56:32Z
INSDC last update2019-08-09T12:56:11Z
INSDC statuspublic
Submitter IdMGYG-HGUT-01870
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Phascolarctobacterium sp.
completeness score98.8
contamination score1.20
metagenomic sourcehuman gut metagenome
sample derived fromERS328964
scientific_nameuncultured Phascolarctobacterium sp.
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5851374
ID:
12520353

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