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Human gut genome

Identifiers
BioSample: SAMEA5852771; SRA: ERS3641295
Organism
uncultured Spirochaetales bacterium
cellular organisms; Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia; Spirochaetales; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationPeru
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-03265
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:53Z
ENA-LAST-UPDATE2019-08-09T12:56:20Z
External IdSAMEA5852771
INSDC center nameEMG
INSDC first public2019-08-06T09:56:53Z
INSDC last update2019-08-09T12:56:20Z
INSDC statuspublic
Submitter IdMGYG-HGUT-03265
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Spirochaetales bacterium
completeness score65.27
contamination score0.10
metagenomic sourcehuman gut metagenome
sample derived fromSRS1170720
scientific_nameuncultured Spirochaetales bacterium
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5852771
ID:
12521767

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