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Human gut genome

Identifiers
BioSample: SAMEA5852773; SRA: ERS3641297
Organism
uncultured Stenotrophomonas sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Stenotrophomonas; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationnot provided
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-03267
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:53Z
ENA-LAST-UPDATE2019-08-09T12:56:20Z
External IdSAMEA5852773
INSDC center nameEMG
INSDC first public2019-08-06T09:56:53Z
INSDC last update2019-08-09T12:56:20Z
INSDC statuspublic
Submitter IdMGYG-HGUT-03267
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Stenotrophomonas sp.
completeness score60.93
contamination score1.27
metagenomic sourcehuman gut metagenome
sample derived fromSRS1170746
scientific_nameuncultured Stenotrophomonas sp.
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5852773
ID:
12521769

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