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Human gut genome

Identifiers
BioSample: SAMEA5853006; SRA: ERS3641530
Organism
uncultured Butyrivibrio sp.
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Butyrivibrio; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationnot provided
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-03500
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:57Z
ENA-LAST-UPDATE2019-08-09T12:56:23Z
External IdSAMEA5853006
INSDC center nameEMG
INSDC first public2019-08-06T09:56:57Z
INSDC last update2019-08-09T12:56:23Z
INSDC statuspublic
Submitter IdMGYG-HGUT-03500
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Butyrivibrio sp.
completeness score89.93
contamination score0.67
metagenomic sourcehuman gut metagenome
sample derived fromSRS476152
scientific_nameuncultured Butyrivibrio sp.
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5853006
ID:
12522002

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