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Human gut genome

Identifiers
BioSample: SAMEA5853245; SRA: ERS3641769
Organism
uncultured Streptococcus sp.
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationnot provided
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-03739
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:57:01Z
ENA-LAST-UPDATE2019-08-09T12:56:25Z
External IdSAMEA5853245
INSDC center nameEMG
INSDC first public2019-08-06T09:57:01Z
INSDC last update2019-08-09T12:56:25Z
INSDC statuspublic
Submitter IdMGYG-HGUT-03739
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Streptococcus sp.
completeness score98.38
contamination score1.73
metagenomic sourcehuman gut metagenome
sample derived fromSRS1101440
scientific_nameuncultured Streptococcus sp.
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5853245
ID:
12522251

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