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Human gut genome

Identifiers
BioSample: SAMEA5853396; SRA: ERS3641920
Organism
uncultured cyanobacterium
cellular organisms; Bacteria; Bacillati; Cyanobacteriota/Melainabacteria group; Cyanobacteriota; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationUSA
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-03890
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:57:03Z
ENA-LAST-UPDATE2019-08-09T12:56:26Z
External IdSAMEA5853396
INSDC center nameEMG
INSDC first public2019-08-06T09:57:03Z
INSDC last update2019-08-09T12:56:26Z
INSDC statuspublic
Submitter IdMGYG-HGUT-03890
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured cyanobacterium
completeness score89.74
contamination score1.28
metagenomic sourcehuman gut metagenome
sample derived fromERS1066711
scientific_nameuncultured cyanobacterium
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5853396
ID:
12522415

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