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Human gut genome

Identifiers
BioSample: SAMEA5853399; SRA: ERS3641923
Organism
uncultured Prevotella sp.
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationUSA
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-03893
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:57:03Z
ENA-LAST-UPDATE2019-08-09T12:56:26Z
External IdSAMEA5853399
INSDC center nameEMG
INSDC first public2019-08-06T09:57:03Z
INSDC last update2019-08-09T12:56:26Z
INSDC statuspublic
Submitter IdMGYG-HGUT-03893
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Prevotella sp.
completeness score95.8
contamination score0.52
metagenomic sourcehuman gut metagenome
sample derived fromERS1066695
scientific_nameuncultured Prevotella sp.
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5853399
ID:
12522418

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