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Human gut genome

Identifiers
BioSample: SAMEA5853570; SRA: ERS3642093
Organism
uncultured Oxalobacter sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Oxalobacter; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationUnited Kingdom
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-04063
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:57:06Z
ENA-LAST-UPDATE2019-08-09T12:56:28Z
External IdSAMEA5853570
INSDC center nameEMG
INSDC first public2019-08-06T09:57:06Z
INSDC last update2019-08-09T12:56:28Z
INSDC statuspublic
Submitter IdMGYG-HGUT-04063
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Oxalobacter sp.
completeness score90.62
contamination score0.03
metagenomic sourcehuman gut metagenome
sample derived fromERS746854
scientific_nameuncultured Oxalobacter sp.
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5853570
ID:
12522600

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