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Chicken_7_mag_24

Identifiers
BioSample: SAMEA7202453; SRA: ERS4962666
Organism
Anaeromassilibacillus sp. An250
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Acutalibacteraceae; Anaeromassilibacillus; unclassified Anaeromassilibacillus
Attributes
collection datenot collected
broad-scale environmental contextGallus gallus domesticus
local-scale environmental contextCaeca
environmental mediumGut contents
geographic locationUnited Kingdom
investigation typemetagenome
isolation sourcemetagenome
project namePRJEB33338
sample nameChicken_7_mag_24
ENA-CHECKLISTERC000047
ENA-FIRST-PUBLIC2020-09-09T17:06:41Z
ENA-LAST-UPDATE2020-08-21T15:49:48Z
External IdSAMEA7202453
INSDC center nameTHE ROSLIN INSTITUTE
INSDC first public2020-09-09T17:06:41Z
INSDC last update2020-08-21T15:49:48Z
INSDC statuspublic
Submitter IdChicken_7_mag_24
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwareMetabat2
binning parameters-v -m 2000
binning softwareMetabat2
common nameAnaeromassilibacillus sp. An250
completeness score99.33
completeness softwareCheckM
contamination score0
geographic location (latitude)55.86513
geographic location (longitude)-3.197356
metagenomic sourceGallus gallus
sample derived fromERS3558282
scientific_nameAnaeromassilibacillus sp. An250
sequencing methodIllumina NovaSeq 6000
taxonomic identity markerCheckM_markers
Description

This sample represents a metagenome assembled genome from the metagenomic sample ERS3558282

BioProject
PRJEB33338 Metagenomics of chicken cecal contents
Retrieve all samples from this project

Submission
EBI; 2020-09-11
Accession:
SAMEA7202453
ID:
16099637

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