Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Caluromys derbianus (Derby's woolly opossum)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Didelphimorphia; Didelphidae; Caluromyinae; Caluromys

Attributes

geographic location	Nicaragua
investigation type	phylogenetic study
sample name	40072
sex	not determined
tissue	blood plasma
BPA_library_ID	52703
BPA_sample_ID	40072
CALLABLE	765638
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:28Z
ENA-LAST-UPDATE	2020-09-25T00:33:06Z
External Id	SAMEA7320983
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:28Z
INSDC last update	2020-09-25T00:33:06Z
INSDC status	public
LOW_COVERAGE	42898
NO_COVERAGE	26
ReadLength	100bp
Submitter Id	40072
TCCP_ID	40072_LANES3
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	Derby's woolly opossum
depthmean	237.16
depthmedian	148
family	Didelphidae
genus	Caluromys
institution_name	Australian Biological Tissue Collection, South Australian Museum
order	Didelphimorphia
phylum	Chordata
scientific_name	Caluromys derbianus
sequencing method	Illumina SBS, short PE reads
species	derbianus
tissue_number	ABTC13725
tissue_preservation	frozen
totalmapped2tgt	0.4044
totalpaired	0.352
totalreadsstart	5634734
voucher_number	no voucher
voucher_or_tissue_number	ABTC13725