Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Phascolosorex dorsalis (narrow-striped marsupial shrew)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Phascolosorex

Attributes

geographic location	Papua New Guinea
investigation type	phylogenetic study
sample name	40080
sex	not determined
tissue	liver
BPA_library_ID	52711
BPA_sample_ID	40080
CALLABLE	489717
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:28Z
ENA-LAST-UPDATE	2020-09-25T00:33:19Z
External Id	SAMEA7320989
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:28Z
INSDC last update	2020-09-25T00:33:19Z
INSDC status	public
LOW_COVERAGE	60485
NO_COVERAGE	171
ReadLength	100bp
Submitter Id	40080
TCCP_ID	40080_LANES3
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	narrow-striped marsupial shrew
depthmean	69.2
depthmedian	21
family	Dasyuridae
genus	Phascolosorex
geographic location (region and locality)	Central Province
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Near Kosipe, Mt Albert Edward
order	Dasyuromorphia
phylum	Chordata
scientific_name	Phascolosorex dorsalis
sequencing method	Illumina SBS, short PE reads
species	dorsalis
state_or_region	Central Province
tissue_number	ABTC42508
tissue_preservation	frozen
totalmapped2tgt	0.2702
totalpaired	0.2312
totalreadsstart	2323372
voucher_number	AM M.12650
voucher_or_tissue_number	AM M.12650
wild_captive	wild