Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Sminthopsis crassicaudata (fat-tailed dunnart)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Sminthopsis

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	40112
sex	female
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/29acc596-d405-4e1b-8d44-ca2d49324f46
BPA_library_ID	52743
BPA_sample_ID	40112
CALLABLE	888893
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:28Z
ENA-LAST-UPDATE	2020-09-25T00:34:16Z
External Id	SAMEA7321018
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:28Z
INSDC last update	2020-09-25T00:34:16Z
INSDC status	public
LOW_COVERAGE	41838
NO_COVERAGE	414
ReadLength	100bp
Submitter Id	40112
TCCP_ID	40112_LANES3
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammalogy
common name	fat-tailed dunnart
decimal_latitude	-29.2
decimal_longitude	141.97
depthmean	245.56
depthmedian	119
family	Dasyuridae
genus	Sminthopsis
geographic location (region and locality)	New South Wales
institution_name	Australian Museum
location_text	Sturt National Park.
order	Dasyuromorphia
phylum	Chordata
scientific_name	Sminthopsis crassicaudata
sequencing method	Illumina SBS, short PE reads
species	crassicaudata
state_or_region	New South Wales
tissue_number	EBU34357
tissue_preservation	frozen
totalmapped2tgt	0.4524
totalpaired	0.3922
totalreadsstart	6256486
voucher_number	AM M.35366.001
voucher_or_tissue_number	AM M.35366.001
wild_captive	wild