Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Organism: Caloprymnus campestris (desert rat kangaroo)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Potoroidae; Caloprymnus

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	52878
sex	not determined
tissue	skin
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/219a8d85-bf1b-4f4c-98bb-21a1468cdb2e
BPA_library_ID	52878
BPA_sample_ID	40256
CALLABLE	1427007
DNA extraction method	Qiagen DNEasy modified for trace samples
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:30Z
ENA-LAST-UPDATE	2020-09-25T00:34:44Z
External Id	SAMEA7321034
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:30Z
INSDC last update	2020-09-25T00:34:44Z
INSDC status	public
LOW_COVERAGE	89506
NO_COVERAGE	155
ReadLength	100bp
Submitter Id	52878
TCCP_ID	52878_AH5VVVBCX2_CTGCGAC_S57
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammalogy
common name	desert rat kangaroo
depthmean	100.42
depthmedian	81
family	Potoroidae
genus	Caloprymnus
geographic location (region and locality)	South Australia
institution_name	Museums Victoria
location_text	Mulka
order	Diprotodontia
phylum	Chordata
scientific_name	Caloprymnus campestris
sequencing method	Illumina SBS, short PE reads
species	campestris
state_or_region	South Australia
tissue_number	NMV C6788
tissue_preservation	dried
totalmapped2tgt	0.6918
totalpaired	0.6829
totalreadsstart	2430746
voucher_number	NMV C6788
voucher_or_tissue_number	NMV C6788
wild_captive	wild