Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Echymipera clara (Clara's echymipera)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Peramelemorphia; Peroryctidae; Echymipera

Attributes

geographic location	Papua New Guinea
investigation type	phylogenetic study
sample name	52895
sex	male
tissue	liver
BPA_library_ID	52895
BPA_sample_ID	40267
CALLABLE	1746210
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:27Z
ENA-LAST-UPDATE	2020-09-25T00:34:52Z
External Id	SAMEA7321038
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:27Z
INSDC last update	2020-09-25T00:34:52Z
INSDC status	public
LOW_COVERAGE	164187
NO_COVERAGE	344
ReadLength	100bp
Submitter Id	52895
TCCP_ID	52895_AH5VVVBCX2_TTAACTC_S74
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammalogy
common name	Clara's echymipera
decimal_latitude	-4.5
decimal_longitude	141.25
depthmean	86.34
depthmedian	45
family	Peramelidae
genus	Echymipera
geographic location (region and locality)	West Sepik Province
institution_name	Australian Museum
location_text	Yapsiei Area, Sargay River E of Boobiari
order	Peramelemorphia
phylum	Chordata
scientific_name	Echymipera clara
sequencing method	Illumina SBS, short PE reads
species	clara
state_or_region	West Sepik Province
tissue_number	EBU26709
tissue_preservation	frozen
totalmapped2tgt	0.6924
totalpaired	0.6342
totalreadsstart	2642269
voucher_number	AM M.13734.001
voucher_or_tissue_number	AM M.13734.001