Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Organism: Notamacropus rufogriseus banksianus
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Notamacropus; Notamacropus rufogriseus

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	52908
sex	female
sub species	banksianus
tissue	muscle
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/031d6b70-f4b7-4622-b77d-e78a57bace92
BPA_library_ID	52908
BPA_sample_ID	40280
CALLABLE	1552525
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:35:15Z
External Id	SAMEA7321051
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:35:15Z
INSDC status	public
LOW_COVERAGE	175463
NO_COVERAGE	252
ReadLength	100bp
Submitter Id	52908
TCCP_ID	52908_AH5VVVBCX2_AACGACC_S87
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammalogy
common name	Red-necked wallaby
decimal_latitude	-32.73
decimal_longitude	152.15
depthmean	45.86
depthmedian	26
family	Macropodidae
genus	Notamacropus
geographic location (region and locality)	New South Wales
institution_name	Australian Museum
location_text	Nelson Bay Golf Club
order	Diprotodontia
phylum	Chordata
scientific_name	Notamacropus rufogriseus banksianus
sequencing method	Illumina SBS, short PE reads
species	rufogriseus
state_or_region	New South Wales
tissue_number	EBU61561
tissue_preservation	frozen
totalmapped2tgt	0.6026
totalpaired	0.5446
totalreadsstart	1469977
voucher_number	AM M.47714.001
voucher_or_tissue_number	AM M.47714.001

BioProject: PRJEB39788 Australian marsupial phylogeny
Retrieve all samples from this project