Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Lagorchestes hirsutus (rufous hare-wallaby)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Lagorchestes

Attributes

investigation type	phylogenetic study
geographic location	Australia
tissue	ear epithelium
sub species	central australia
identified by	Colleen Sims \| DBCA
sex	male
bioproject_accession	PRJEB39788
sequencing method	Illumina SBS, short PE reads
geographic location (region and locality)	Western Australia
BPA_sample_ID	40396
BPA_library_ID	53368
voucher_number	no voucher
tissue_number	DEC02903
voucher_or_tissue_number	DEC02903
institution_name	Department of Biodiversity, Conservation and Attractions
collection	Mammal
tissue_preservation	ethanol
phylum	Chordata
class	Mammalia
order	Diprotodontia
family	Macropodidae
genus	Lagorchestes
species	hirsutus
wild_captive	captive
state_or_region	Western Australia
location_text	Matuwa (Lorna Glen) enclosure, Wiluna
decimal_latitude	-20.4
decimal_longitude	115.57
DNA_extraction_method	salting out
TCCP_ID	53368_AHGVYGBCX2_ATGCCGC_S30
depthmean	63.34
depthmedian	53
totalreadsstart	3809212
totalmapped2tgt	0.3527
totalpaired	0.3335
CALLABLE	1745658
NO_COVERAGE	253
LOW_COVERAGE	174567
ReadLength	100bp
AtlasLivingAustralia	NA
ENA-FIRST-PUBLIC	2021-01-05
ENA-LAST-UPDATE	2020-09-25