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Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Identifiers
BioSample: SAMEA7321139; Sample name: 53420; SRA: ERS5079675
Organism
Isoodon obesulus (southern brown bandicoot)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Peramelemorphia; Peramelidae; Isoodon
Attributes
investigation typephylogenetic study
geographic locationAustralia
tissueunknown
sub speciesmount lofty ranges
identified byunknown
sexnot determined
bioproject_accessionPRJEB39788
sequencing methodIllumina SBS, short PE reads
geographic location (region and locality)South Australia
BPA_sample_ID40713
BPA_library_ID53420
voucher_numberno voucher
tissue_numberN861
voucher_or_tissue_numberN861
institution_nameSouth Australian Museum
collectionunknown
tissue_preservationunknown
phylumChordata
classMammalia
orderPeramelemorphia
familyPeramelidae
genusIsoodon
speciesobesulus
wild_captiveunknown
state_or_regionSouth Australia
location_textDeep Creek Conservation Park, Fleurieu Peninsula
decimal_latitude-35.64
decimal_longitude138.22
DNA_extraction_methodunknown
TCCP_ID53420_AHGVYGBCX2_CAGCATC_S82
depthmean84.5
depthmedian60
totalreadsstart4985483
totalmapped2tgt0.3302
totalpaired0.2941
CALLABLE1553611
NO_COVERAGE19
LOW_COVERAGE163959
ReadLength100bp
AtlasLivingAustraliahttps://biocache.ala.org.au/occurrences/8fa005e7-9f3f-4305-af4e-772b2e633f40
ENA-FIRST-PUBLIC2021-01-05
ENA-LAST-UPDATE2020-09-25
BioProject
PRJEB39788 Australian marsupial phylogeny
Retrieve all samples from this project

Submission
EBI; 2021-01-06
Accession:
SAMEA7321139
ID:
17239596

BioProject Nucleotide

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