Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Organism: Petrogale concinna monastria
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Petrogale; Petrogale concinna

Attributes

geographic location	Australia
identified by	Norm McKenzie
investigation type	phylogenetic study
sample name	53436
sex	male
sub species	monastria
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/504381b4-9889-43c7-90ce-3f8a4908e17e
BPA_library_ID	53436
BPA_sample_ID	40727
CALLABLE	2158307
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:30Z
ENA-LAST-UPDATE	2020-09-25T00:37:58Z
External Id	SAMEA7321154
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:30Z
INSDC last update	2020-09-25T00:37:58Z
INSDC status	public
LOW_COVERAGE	191788
NO_COVERAGE	115
ReadLength	100bp
Submitter Id	53436
TCCP_ID	53436_AHGVYVBCX2_CTCTGCA_S2
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	Nabarlek
decimal_latitude	-16.25
decimal_longitude	123.62
depthmean	115.1
depthmedian	76
family	Macropodidae
genus	Petrogale
geographic location (region and locality)	Western Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Hidden Island
order	Diprotodontia
phylum	Chordata
scientific_name	Petrogale concinna monastria
sequencing method	Illumina SBS, short PE reads
species	concinna
state_or_region	Western Australia
tissue_number	ABTC7770
tissue_preservation	frozen
totalmapped2tgt	0.7577
totalpaired	0.7272
totalreadsstart	3673793
voucher_number	WAM M23036
voucher_or_tissue_number	WAM M23036
wild_captive	wild

BioProject: PRJEB39788 Australian marsupial phylogeny
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