Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Organism: Petrogale lateralis hacketti
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Petrogale; Petrogale lateralis

Attributes

geographic location	Australia
identified by	Gerald M Maynes
investigation type	phylogenetic study
sample name	53448
sex	female
sub species	hacketti
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/194a4de4-ad77-49d1-81eb-67e2d2d7fa16
BPA_library_ID	53448
BPA_sample_ID	40739
CALLABLE	1823076
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:30Z
ENA-LAST-UPDATE	2020-09-25T00:38:18Z
External Id	SAMEA7321166
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:30Z
INSDC last update	2020-09-25T00:38:18Z
INSDC status	public
LOW_COVERAGE	200050
NO_COVERAGE	92
ReadLength	100bp
Submitter Id	53448
TCCP_ID	53448_AHGVYVBCX2_TTGGATC_S14
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammalogy
common name	Black-footed rock-wallaby
decimal_latitude	-34.08
decimal_longitude	122.97
depthmean	70.77
depthmedian	50
family	Macropodidae
genus	Petrogale
geographic location (region and locality)	South Australia
institution_name	Australian Museum
location_text	Westall Island, Recherche Archipelago
order	Diprotodontia
phylum	Chordata
scientific_name	Petrogale lateralis hacketti
sequencing method	Illumina SBS, short PE reads
species	lateralis
state_or_region	South Australia
tissue_number	S217
tissue_preservation	frozen
totalmapped2tgt	0.7761
totalpaired	0.7533
totalreadsstart	1893050
voucher_number	AM M.15310
voucher_or_tissue_number	AM M.15310
wild_captive	captive

BioProject: PRJEB39788 Australian marsupial phylogeny
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