Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Isoodon obesulus affinis
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Peramelemorphia; Peramelidae; Isoodon; Isoodon obesulus

Attributes

geographic location	Australia
identified by	Michael Driessen
investigation type	phylogenetic study
sample name	53501
sex	male
sub species	affinis
tissue	ear epithelium
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/1f11659d-ff5a-472d-b98e-7f01b6526877
BPA_library_ID	53501
BPA_sample_ID	40792
CALLABLE	1514217
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:39:38Z
External Id	SAMEA7321215
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:39:38Z
INSDC status	public
LOW_COVERAGE	179975
NO_COVERAGE	8
ReadLength	100bp
Submitter Id	53501
TCCP_ID	53501_AHGVYVBCX2_GCCTACG_S67
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammalogy
common name	Southern brown bandicoot
decimal_latitude	-43
decimal_longitude	147.3
depthmean	83.04
depthmedian	53
family	Peramelidae
genus	Isoodon
geographic location (region and locality)	Tasmania
institution_name	Australian Museum
location_text	Peter Murrell Reserve
order	Peramelemorphia
phylum	Chordata
scientific_name	Isoodon obesulus affinis
sequencing method	Illumina SBS, short PE reads
species	obesulus
state_or_region	Tasmania
tissue_number	EBU90753
tissue_preservation	ethanol
totalmapped2tgt	0.7005
totalpaired	0.653
totalreadsstart	2113042
voucher_number	AM M.47291.001
voucher_or_tissue_number	AM M.47291.001
wild_captive	wild