Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Lagorchestes hirsutus (rufous hare-wallaby)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Lagorchestes

Attributes

investigation type	phylogenetic study
geographic location	Australia
tissue	skin
sub species	bernieri
identified by	William David Lindsay Ride
sex	male
bioproject_accession	PRJEB39788
sequencing method	Illumina SBS, short PE reads
geographic location (region and locality)	Western Australia
BPA_sample_ID	40809
BPA_library_ID	53518
voucher_number	WAM M3647
tissue_number	WAM M3647
voucher_or_tissue_number	WAM M3647
institution_name	Western Australian Museum
collection	Mammal
tissue_preservation	dried
phylum	Chordata
class	Mammalia
order	Diprotodontia
family	Macropodidae
genus	Lagorchestes
species	hirsutus
wild_captive	wild
state_or_region	Western Australia
location_text	Disaster Cove
decimal_latitude	-25
decimal_longitude	113.12
DNA_extraction_method	salting out
TCCP_ID	53518_AHGVYVBCX2_CCTCTAG_S84
depthmean	109.89
depthmedian	92
totalreadsstart	3079889
totalmapped2tgt	0.753
totalpaired	0.7341
CALLABLE	1811156
NO_COVERAGE	166
LOW_COVERAGE	171510
ReadLength	100bp
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/cb25d7f9-c029-431b-adb5-9a7965588c1c
ENA-FIRST-PUBLIC	2021-01-05
ENA-LAST-UPDATE	2020-09-25