Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Antechinus leo (cinnamon antechinus)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Antechinus

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	55309
sex	male
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/6c3a37a4-848a-409c-ad53-a18f0936e5f8
BPA_library_ID	55309
BPA_sample_ID	41898
CALLABLE	1544522
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:41:54Z
External Id	SAMEA7321292
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:41:54Z
INSDC status	public
LOW_COVERAGE	171779
NO_COVERAGE	311
ReadLength	150bp
Submitter Id	55309
TCCP_ID	55309_HWWJFAFXY_CTGCGAC_S57
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	cinnamon antechinus
decimal_latitude	-13.77
decimal_longitude	143.33
depthmean	74.11
depthmedian	60
family	Dasyuridae
genus	Antechinus
geographic location (region and locality)	Queensland
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	McIlwraith Ranges
order	Dasyuromorphia
phylum	Chordata
scientific_name	Antechinus leo
sequencing method	Illumina SBS, short PE reads
species	leo
state_or_region	Queensland
tissue_number	ABTC07539
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.8181
totalpaired	0.8079
totalreadsstart	1208230
voucher_number	AM M.11246
voucher_or_tissue_number	AM M.11246